DaRe_Syx18

Sequence Information

Short name: DaRe_Syx18
Aliases: stx18; zgc:112326
Species: Danio rerio
Status: live
dbxref: NP_001019596.1
Source database: NCBI_refseq
Foreign annotation: gi|66773090|ref|NP_001019596.1| syntaxin-18 [Danio rerio]

Taxonomy Information

clade: Otophysi
kingdom: Metazoa
phylum: Chordata
order: Cypriniformes
family: Danionidae
genus: Danio
Aminoacid sequence:
Protein Layout

Motif Data

Domain: Habc E-value: 2.3E-62 Hmm-Model/Domaingroup: Ha.I.Syx18.Metazoa Position: 46-172 (length: 127) Method: hmm
Aminoacid sequence with motif:
MAADITLLFKASVKTVKTRNKALGLMETTGREEPGAQKRPRPRQRDSFSCKAREVISNISKLKDFLLQHRKDYVNAGSVMSSEVSRMTDSERDQIDQDAQIFMRTCAEAISQLRSEMDKKQVSMQVKDHRAAVLDLIDSYLKGVCKLYSEQRAVRVKRVVDKKRLSRLEPEQINTEKRQSDGEENDKPVSDGNVDLWEENRVEDDLSPEEIQMFEQENQRLVGEMNSLLDEVRQIEGKVVEISRLQEIFSEKVLQQETEIDSIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
Hmm-Consensus:
Similarity:
Found Motif:
s e f s k k a k e v v s q I t k L r d f L l e h r k d Y i n a s s h l s s e a s r m t d a e r d q i d q d a q k i m r t c s q a i k q l k k e i a k e k r s a q v k e h r e a V l d l l e k y l k r v c k l y s e q r a i r v k r v v d k k r l s r l e p e k
+ + f s k a + e v + s + I + k L + d f L l + h r k d Y + n a s + s s e + s r m t d + e r d q i d q d a q + + m r t c + + a i + q l + + e + k + + + s q v k + h r a V l d l + + + y l k + v c k l y s e q r a + r v k r v v d k k r l s r l e p e +
D S F S C K A R E V I S N I S K L K D F L L Q H R K D Y V N A G S V M S S E V S R M T D S E R D Q I D Q D A Q I F M R T C A E A I S Q L R S E M D K K Q V S M Q V K D H R A A V L D L I D S Y L K G V C K L Y S E Q R A V R V K R V V D K K R L S R L E P E Q
Domain: SNARE E-value: 6.5E-33 Hmm-Model/Domaingroup: Qa.I.Syx18.Metazoa Position: 232-284 (length: 53) Method: hmm
Aminoacid sequence with motif:
MAADITLLFKASVKTVKTRNKALGLMETTGREEPGAQKRPRPRQRDSFSCKAREVISNISKLKDFLLQHRKDYVNAGSVMSSEVSRMTDSERDQIDQDAQIFMRTCAEAISQLRSEMDKKQVSMQVKDHRAAVLDLIDSYLKGVCKLYSEQRAVRVKRVVDKKRLSRLEPEQINTEKRQSDGEENDKPVSDGNVDLWEENRVEDDLSPEEIQMFEQENQRLVGEMNSLLDEVRQIEGKVVEISRLQEIFSEKVLQQETEIDSIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
Hmm-Consensus:
Similarity:
Found Motif:
v r q I E g k v v e I s r L q e i F t E k v l e Q e k d I d r I h e t v v g t t e n i k e G N e q I R e A
v r q I E g k v v e I s r L q e i F + E k v l + Q e + + I d + I h + + v v g + t e n + k e G N e + I R e A
V R Q I E G K V V E I S R L Q E I F S E K V L Q Q E T E I D S I H Q L V V G A T E N V K E G N E D I R E A